Construct: shRNA TRCN0000233451
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_028967.1-625s21c1
- DNA Barcode:
- GGGTCTTTCTCTAAGCTTGAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Batf2 (74481)
- Gene Description:
- basic leucine zipper transcription factor, ATF-like 2
- Transcript:
- RefSeq NM_028967.1 (CURRENT)
- Match location:
- Position 625 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000233451)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GGGTCTTTCTCTAAGCTTGAT
- Hairpin Sequence:
-
5'-CCGG-GGGTCTTTCTCTAAGCTTGAT-CTCGAG-ATCAAGCTTAGAGAAAGACCC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGGGTCTTTCTCTAAGCTTGATCTCGAGATCAAGCTTAGAGAAAGACCCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGGGTCTTTCTCTAAGCTTGATCTCGAGATCAAGCTTAGAGAAAGACCC-3'
Other clones with same target sequence:
(none)
