Construct: shRNA TRCN0000234090

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009366.2-219s21c1
DNA Barcode:
ATTTCTTTCTTGTCGTCTTTG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Tsc22d1 (21807)
Gene Description:
TSC22 domain family, member 1
Transcript:
RefSeq NM_009366.2 (NON-CURRENT)
Match location:
Position 219 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000234090)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ATTTCTTTCTTGTCGTCTTTG
Hairpin Sequence:
5'-CCGG-ATTTCTTTCTTGTCGTCTTTG-CTCGAG-CAAAGACGACAAGAAAGAAAT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGATTTCTTTCTTGTCGTCTTTGCTCGAGCAAAGACGACAAGAAAGAAATTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAATTTCTTTCTTGTCGTCTTTGCTCGAGCAAAGACGACAAGAAAGAAAT-3'

Other clones with same target sequence:

(none)