Construct: shRNA TRCN0000234848

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002449.4-561s21c1
DNA Barcode:
AGCGCAAGTTCCGTCAGAAAC

Original Target:

Taxon:
Homo sapiens (human)
Gene:
MSX2 (4488)
Gene Description:
msh homeobox 2
Transcript:
RefSeq NM_002449.4 (NON-CURRENT)
Match location:
Position 561 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000234848)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGCGCAAGTTCCGTCAGAAAC
Hairpin Sequence:
5'-CCGG-AGCGCAAGTTCCGTCAGAAAC-CTCGAG-GTTTCTGACGGAACTTGCGCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGCGCAAGTTCCGTCAGAAACCTCGAGGTTTCTGACGGAACTTGCGCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGCGCAAGTTCCGTCAGAAACCTCGAGGTTTCTGACGGAACTTGCGCT-3'

Other clones with same target sequence:

(none)