Construct: shRNA TRCN0000238738

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001081290.1-2177s21c1
DNA Barcode:
CAACCTCGACCTGGCTATTTC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Prrc2c (226562)
Gene Description:
proline-rich coiled-coil 2C
Transcript:
RefSeq NM_001081290.1 (CURRENT)
Match location:
Position 2177 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000238738)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAACCTCGACCTGGCTATTTC
Hairpin Sequence:
5'-CCGG-CAACCTCGACCTGGCTATTTC-CTCGAG-GAAATAGCCAGGTCGAGGTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAACCTCGACCTGGCTATTTCCTCGAGGAAATAGCCAGGTCGAGGTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAACCTCGACCTGGCTATTTCCTCGAGGAAATAGCCAGGTCGAGGTTG-3'

Other clones with same target sequence:

(none)