Construct: shRNA TRCN0000239124

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001033354.2-980s21c1
DNA Barcode:
GAACTCTCCCTTGACCTAAAG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Iqsec3 (243621)
Gene Description:
IQ motif and Sec7 domain 3
Transcript:
RefSeq NM_001033354.2 (NON-CURRENT)
Match location:
Position 980 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000239124)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAACTCTCCCTTGACCTAAAG
Hairpin Sequence:
5'-CCGG-GAACTCTCCCTTGACCTAAAG-CTCGAG-CTTTAGGTCAAGGGAGAGTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAACTCTCCCTTGACCTAAAGCTCGAGCTTTAGGTCAAGGGAGAGTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAACTCTCCCTTGACCTAAAGCTCGAGCTTTAGGTCAAGGGAGAGTTC-3'

Other clones with same target sequence:

(none)