Construct: shRNA TRCN0000239260

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001033281.3-1180s21c1
DNA Barcode:
GAACGTCCCTTCCACCGTAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Prdm6 (225518)
Gene Description:
PR domain containing 6
Transcript:
RefSeq NM_001033281.3 (CURRENT)
Match location:
Position 1180 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000239260)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAACGTCCCTTCCACCGTAAT
Hairpin Sequence:
5'-CCGG-GAACGTCCCTTCCACCGTAAT-CTCGAG-ATTACGGTGGAAGGGACGTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAACGTCCCTTCCACCGTAATCTCGAGATTACGGTGGAAGGGACGTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAACGTCCCTTCCACCGTAATCTCGAGATTACGGTGGAAGGGACGTTC-3'

Other clones with same target sequence:

(none)