Construct: shRNA TRCN0000248781

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_022021.1-1558s21c1
DNA Barcode:
GCCTTTGGGAACCGTAGAAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Cables1 (63955)
Gene Description:
CDK5 and Abl enzyme substrate 1
Transcript:
RefSeq NM_022021.1 (NON-CURRENT)
Match location:
Position 1558 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000248781)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCTTTGGGAACCGTAGAAAT
Hairpin Sequence:
5'-CCGG-GCCTTTGGGAACCGTAGAAAT-CTCGAG-ATTTCTACGGTTCCCAAAGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCTTTGGGAACCGTAGAAATCTCGAGATTTCTACGGTTCCCAAAGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCTTTGGGAACCGTAGAAATCTCGAGATTTCTACGGTTCCCAAAGGC-3'

Other clones with same target sequence:

  1. TRCN0000194643