Construct: shRNA TRCN0000249029

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_011727.2-641s21c1
DNA Barcode:
TGAAGAGCTGAGACGTCTTAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Xlr3c (22446)
Gene Description:
X-linked lymphocyte-regulated 3C
Transcript:
RefSeq NM_011727.2 (CURRENT)
Match location:
Position 641 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000249029)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TGAAGAGCTGAGACGTCTTAT
Hairpin Sequence:
5'-CCGG-TGAAGAGCTGAGACGTCTTAT-CTCGAG-ATAAGACGTCTCAGCTCTTCA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTGAAGAGCTGAGACGTCTTATCTCGAGATAAGACGTCTCAGCTCTTCATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATGAAGAGCTGAGACGTCTTATCTCGAGATAAGACGTCTCAGCTCTTCA-3'

Other clones with same target sequence:

(none)