Construct: shRNA TRCN0000249189

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_178594.2-250s21c1
DNA Barcode:
TCGTCATCCAGTGGCTGAAAG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Vtcn1 (242122)
Gene Description:
V-set domain containing T cell activation inhibitor 1
Transcript:
RefSeq NM_178594.2 (NON-CURRENT)
Match location:
Position 250 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000249189)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TCGTCATCCAGTGGCTGAAAG
Hairpin Sequence:
5'-CCGG-TCGTCATCCAGTGGCTGAAAG-CTCGAG-CTTTCAGCCACTGGATGACGA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTCGTCATCCAGTGGCTGAAAGCTCGAGCTTTCAGCCACTGGATGACGATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATCGTCATCCAGTGGCTGAAAGCTCGAGCTTTCAGCCACTGGATGACGA-3'

Other clones with same target sequence:

(none)