Construct: shRNA TRCN0000249951

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_177472.4-3655s21c1
DNA Barcode:
GCCACACACACAGCCTATTAC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Slx4 (52864)
Gene Description:
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
Transcript:
RefSeq NM_177472.4 (NON-CURRENT)
Match location:
Position 3655 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000249951)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCACACACACAGCCTATTAC
Hairpin Sequence:
5'-CCGG-GCCACACACACAGCCTATTAC-CTCGAG-GTAATAGGCTGTGTGTGTGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCACACACACAGCCTATTACCTCGAGGTAATAGGCTGTGTGTGTGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCACACACACAGCCTATTACCTCGAGGTAATAGGCTGTGTGTGTGGC-3'

Other clones with same target sequence:

(none)