Construct: shRNA TRCN0000250618
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_172474.4-1868s21c1
- DNA Barcode:
- ATCTCATCAAATCGAGTAAAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Tyw3 (209584)
- Gene Description:
- tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
- Transcript:
- RefSeq NM_172474.4 (NON-CURRENT)
- Match location:
- Position 1868 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000250618)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ATCTCATCAAATCGAGTAAAT
- Hairpin Sequence:
-
5'-CCGG-ATCTCATCAAATCGAGTAAAT-CTCGAG-ATTTACTCGATTTGATGAGAT-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGATCTCATCAAATCGAGTAAATCTCGAGATTTACTCGATTTGATGAGATTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAATCTCATCAAATCGAGTAAATCTCGAGATTTACTCGATTTGATGAGAT-3'
Other clones with same target sequence:
(none)
