Construct: shRNA TRCN0000252743
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_001038695.2-649s21c1
- DNA Barcode:
- TCGGCTTTCCCTTACTGATAA
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Kdm3a (104263)
- Gene Description:
- lysine (K)-specific demethylase 3A
- Transcript:
- RefSeq NM_001038695.2 (NON-CURRENT)
- Match location:
- Position 649 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000252743)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- TCGGCTTTCCCTTACTGATAA
- Hairpin Sequence:
-
5'-CCGG-TCGGCTTTCCCTTACTGATAA-CTCGAG-TTATCAGTAAGGGAAAGCCGA-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGTCGGCTTTCCCTTACTGATAACTCGAGTTATCAGTAAGGGAAAGCCGATTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAATCGGCTTTCCCTTACTGATAACTCGAGTTATCAGTAAGGGAAAGCCGA-3'
Other clones with same target sequence:
(none)
