Construct: shRNA TRCN0000253735

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_017950.2-3616s21c1
DNA Barcode:
TTAGCCACTCAGCAATTTAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CCDC40 (55036)
Gene Description:
coiled-coil domain containing 40
Transcript:
RefSeq NM_017950.2 (NON-CURRENT)
Match location:
Position 3616 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000253735)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TTAGCCACTCAGCAATTTAAT
Hairpin Sequence:
5'-CCGG-TTAGCCACTCAGCAATTTAAT-CTCGAG-ATTAAATTGCTGAGTGGCTAA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTTAGCCACTCAGCAATTTAATCTCGAGATTAAATTGCTGAGTGGCTAATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATTAGCCACTCAGCAATTTAATCTCGAGATTAAATTGCTGAGTGGCTAA-3'

Other clones with same target sequence:

(none)