Construct: shRNA TRCN0000254659

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001081208.1-1839s21c1
DNA Barcode:
AGGATAAGTCAGTACAATTTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Hs3st5 (319415)
Gene Description:
heparan sulfate (glucosamine) 3-O-sulfotransferase 5
Transcript:
RefSeq NM_001081208.1 (NON-CURRENT)
Match location:
Position 1839 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000254659)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGGATAAGTCAGTACAATTTA
Hairpin Sequence:
5'-CCGG-AGGATAAGTCAGTACAATTTA-CTCGAG-TAAATTGTACTGACTTATCCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGGATAAGTCAGTACAATTTACTCGAGTAAATTGTACTGACTTATCCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGGATAAGTCAGTACAATTTACTCGAGTAAATTGTACTGACTTATCCT-3'

Other clones with same target sequence:

(none)