Construct: shRNA TRCN0000254974

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001081061.1-4311s21c1
DNA Barcode:
AGGATGCTTCACCGCCAAATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Bdp1 (544971)
Gene Description:
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Transcript:
RefSeq NM_001081061.1 (CURRENT)
Match location:
Position 4311 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000254974)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AGGATGCTTCACCGCCAAATT
Hairpin Sequence:
5'-CCGG-AGGATGCTTCACCGCCAAATT-CTCGAG-AATTTGGCGGTGAAGCATCCT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAGGATGCTTCACCGCCAAATTCTCGAGAATTTGGCGGTGAAGCATCCTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAGGATGCTTCACCGCCAAATTCTCGAGAATTTGGCGGTGAAGCATCCT-3'

Other clones with same target sequence:

(none)