Construct: shRNA TRCN0000256670

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_177151.3-6183s21c1
DNA Barcode:
CCCGAAGCTTCTGACTATAAC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Vps13b (666173)
Gene Description:
vacuolar protein sorting 13B
Transcript:
RefSeq NM_177151.3 (CURRENT)
Match location:
Position 6183 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000256670)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCGAAGCTTCTGACTATAAC
Hairpin Sequence:
5'-CCGG-CCCGAAGCTTCTGACTATAAC-CTCGAG-GTTATAGTCAGAAGCTTCGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCGAAGCTTCTGACTATAACCTCGAGGTTATAGTCAGAAGCTTCGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCGAAGCTTCTGACTATAACCTCGAGGTTATAGTCAGAAGCTTCGGG-3'

Other clones with same target sequence:

(none)