Construct: shRNA TRCN0000258240

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001033329.2-1523s21c1
DNA Barcode:
GGCGCATTGACATGGATAAAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Arhgef9 (236915)
Gene Description:
CDC42 guanine nucleotide exchange factor (GEF) 9
Transcript:
RefSeq NM_001033329.2 (NON-CURRENT)
Match location:
Position 1523 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000258240)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GGCGCATTGACATGGATAAAT
Hairpin Sequence:
5'-CCGG-GGCGCATTGACATGGATAAAT-CTCGAG-ATTTATCCATGTCAATGCGCC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGGCGCATTGACATGGATAAATCTCGAGATTTATCCATGTCAATGCGCCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGGCGCATTGACATGGATAAATCTCGAGATTTATCCATGTCAATGCGCC-3'

Other clones with same target sequence:

(none)