Construct: shRNA TRCN0000264025

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_178541.1-522s21c1
DNA Barcode:
TGGAAGTCCTTGGTTACTTAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
LOC339047 (339047)
Gene Description:
hypothetical protein LOC339047
Transcript:
RefSeq NM_178541.1 (NON-CURRENT)
Match location:
Position 522 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000264025)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TGGAAGTCCTTGGTTACTTAT
Hairpin Sequence:
5'-CCGG-TGGAAGTCCTTGGTTACTTAT-CTCGAG-ATAAGTAACCAAGGACTTCCA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTGGAAGTCCTTGGTTACTTATCTCGAGATAAGTAACCAAGGACTTCCATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATGGAAGTCCTTGGTTACTTATCTCGAGATAAGTAACCAAGGACTTCCA-3'

Other clones with same target sequence:

(none)