Construct: shRNA TRCN0000264412

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_025723.2-740s21c1
DNA Barcode:
CATCGCTTGTCTCCCTATTTG

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Henmt1 (66715)
Gene Description:
HEN1 methyltransferase homolog 1 (Arabidopsis)
Transcript:
RefSeq NM_025723.2 (CURRENT)
Match location:
Position 740 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000264412)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CATCGCTTGTCTCCCTATTTG
Hairpin Sequence:
5'-CCGG-CATCGCTTGTCTCCCTATTTG-CTCGAG-CAAATAGGGAGACAAGCGATG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCATCGCTTGTCTCCCTATTTGCTCGAGCAAATAGGGAGACAAGCGATGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACATCGCTTGTCTCCCTATTTGCTCGAGCAAATAGGGAGACAAGCGATG-3'

Other clones with same target sequence:

(none)