Construct: shRNA TRCN0000267518

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001081061.1-6688s21c1
DNA Barcode:
TCTGCTGCCAGCACCTATATT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Bdp1 (544971)
Gene Description:
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
Transcript:
RefSeq NM_001081061.1 (CURRENT)
Match location:
Position 6688 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000267518)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TCTGCTGCCAGCACCTATATT
Hairpin Sequence:
5'-CCGG-TCTGCTGCCAGCACCTATATT-CTCGAG-AATATAGGTGCTGGCAGCAGA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTCTGCTGCCAGCACCTATATTCTCGAGAATATAGGTGCTGGCAGCAGATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATCTGCTGCCAGCACCTATATTCTCGAGAATATAGGTGCTGGCAGCAGA-3'

Other clones with same target sequence:

(none)