Construct: shRNA TRCN0000269606
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_001048196.1-749s21c1
- DNA Barcode:
- ACCATGTCTTTCTAATGTTTG
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Krtap4-1 (665891)
- Gene Description:
- keratin associated protein 4-1
- Transcript:
- RefSeq NM_001048196.1 (CURRENT)
- Match location:
- Position 749 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000269606)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ACCATGTCTTTCTAATGTTTG
- Hairpin Sequence:
-
5'-CCGG-ACCATGTCTTTCTAATGTTTG-CTCGAG-CAAACATTAGAAAGACATGGT-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGACCATGTCTTTCTAATGTTTGCTCGAGCAAACATTAGAAAGACATGGTTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAACCATGTCTTTCTAATGTTTGCTCGAGCAAACATTAGAAAGACATGGT-3'
Other clones with same target sequence:
(none)
