Construct: shRNA TRCN0000272742

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_005243.2-1433s21c1
DNA Barcode:
ATGATCTGGCAGACTTCTTTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
EWSR1 (2130)
Gene Description:
EWS RNA binding protein 1
Transcript:
RefSeq NM_005243.2 (NON-CURRENT)
Match location:
Position 1433 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000272742)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ATGATCTGGCAGACTTCTTTA
Hairpin Sequence:
5'-CCGG-ATGATCTGGCAGACTTCTTTA-CTCGAG-TAAAGAAGTCTGCCAGATCAT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGATGATCTGGCAGACTTCTTTACTCGAGTAAAGAAGTCTGCCAGATCATTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAATGATCTGGCAGACTTCTTTACTCGAGTAAAGAAGTCTGCCAGATCAT-3'

Other clones with same target sequence:

  1. TRCN0000375872