Construct: shRNA TRCN0000280593
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_002540.3-1701s21c1
- DNA Barcode:
- CCGAGACAAAGAGAGCTTGAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- ODF2 (4957)
- Gene Description:
- outer dense fiber of sperm tails 2
- Transcript:
- RefSeq NM_002540.3 (NON-CURRENT)
- Match location:
- Position 1701 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000280593)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CCGAGACAAAGAGAGCTTGAA
- Hairpin Sequence:
-
5'-CCGG-CCGAGACAAAGAGAGCTTGAA-CTCGAG-TTCAAGCTCTCTTTGTCTCGG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCCGAGACAAAGAGAGCTTGAACTCGAGTTCAAGCTCTCTTTGTCTCGGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACCGAGACAAAGAGAGCTTGAACTCGAGTTCAAGCTCTCTTTGTCTCGG-3'
Other clones with same target sequence:
-
TRCN0000139291
