Construct: shRNA TRCN0000284853

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_001748.4-1961s21c1
DNA Barcode:
TATGGTTGACATGCTAGATTC

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CAPN2 (824)
Gene Description:
calpain 2
Transcript:
RefSeq NM_001748.4 (NON-CURRENT)
Match location:
Position 1961 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000284853)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TATGGTTGACATGCTAGATTC
Hairpin Sequence:
5'-CCGG-TATGGTTGACATGCTAGATTC-CTCGAG-GAATCTAGCATGTCAACCATA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTATGGTTGACATGCTAGATTCCTCGAGGAATCTAGCATGTCAACCATATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATATGGTTGACATGCTAGATTCCTCGAGGAATCTAGCATGTCAACCATA-3'

Other clones with same target sequence:

(none)