Construct: shRNA TRCN0000286069
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_005513.2-1084s21c1
- DNA Barcode:
- GCACTGCTCATTCACGAGAAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- GTF2E1 (2960)
- Gene Description:
- general transcription factor IIE subunit 1
- Transcript:
- RefSeq NM_005513.2 (NON-CURRENT)
- Match location:
- Position 1084 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000286069)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCACTGCTCATTCACGAGAAA
- Hairpin Sequence:
-
5'-CCGG-GCACTGCTCATTCACGAGAAA-CTCGAG-TTTCTCGTGAATGAGCAGTGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCACTGCTCATTCACGAGAAACTCGAGTTTCTCGTGAATGAGCAGTGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCACTGCTCATTCACGAGAAACTCGAGTTTCTCGTGAATGAGCAGTGC-3'
Other clones with same target sequence:
-
TRCN0000020723
