Construct: shRNA TRCN0000287312

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_016813.2-572s21c1
DNA Barcode:
CCATCGAGTTTCACTATGAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Nxf1 (53319)
Gene Description:
nuclear RNA export factor 1
Transcript:
RefSeq NM_016813.2 (CURRENT)
Match location:
Position 572 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000287312)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCATCGAGTTTCACTATGAAA
Hairpin Sequence:
5'-CCGG-CCATCGAGTTTCACTATGAAA-CTCGAG-TTTCATAGTGAAACTCGATGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCATCGAGTTTCACTATGAAACTCGAGTTTCATAGTGAAACTCGATGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCATCGAGTTTCACTATGAAACTCGAGTTTCATAGTGAAACTCGATGG-3'

Other clones with same target sequence:

  1. TRCN0000102269