Construct: shRNA TRCN0000287550

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_178622.4-388s21c1
DNA Barcode:
GAACAGATGTATCAGGACAAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Suds3 (71954)
Gene Description:
suppressor of defective silencing 3 homolog (S. cerevisiae)
Transcript:
RefSeq NM_178622.4 (NON-CURRENT)
Match location:
Position 388 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000287550)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GAACAGATGTATCAGGACAAA
Hairpin Sequence:
5'-CCGG-GAACAGATGTATCAGGACAAA-CTCGAG-TTTGTCCTGATACATCTGTTC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGAACAGATGTATCAGGACAAACTCGAGTTTGTCCTGATACATCTGTTCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGAACAGATGTATCAGGACAAACTCGAGTTTGTCCTGATACATCTGTTC-3'

Other clones with same target sequence:

  1. TRCN0000039314