Construct: shRNA TRCN0000289000
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_003088.2-1170s21c1
- DNA Barcode:
- CAAGTTTGTGACCTCCAAGAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- FSCN1 (6624)
- Gene Description:
- fascin actin-bundling protein 1
- Transcript:
- RefSeq NM_003088.2 (NON-CURRENT)
- Match location:
- Position 1170 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000289000)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- CAAGTTTGTGACCTCCAAGAA
- Hairpin Sequence:
-
5'-CCGG-CAAGTTTGTGACCTCCAAGAA-CTCGAG-TTCTTGGAGGTCACAAACTTG-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGCAAGTTTGTGACCTCCAAGAACTCGAGTTCTTGGAGGTCACAAACTTGTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAACAAGTTTGTGACCTCCAAGAACTCGAGTTCTTGGAGGTCACAAACTTG-3'
Other clones with same target sequence:
-
TRCN0000123042
