Construct: shRNA TRCN0000291534

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004105.3-965s21c1
DNA Barcode:
GCGTAGACATAGATGAATGTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
EFEMP1 (2202)
Gene Description:
EGF containing fibulin extracellular matrix protein 1
Transcript:
RefSeq NM_004105.3 (NON-CURRENT)
Match location:
Position 965 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000291534)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCGTAGACATAGATGAATGTA
Hairpin Sequence:
5'-CCGG-GCGTAGACATAGATGAATGTA-CTCGAG-TACATTCATCTATGTCTACGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCGTAGACATAGATGAATGTACTCGAGTACATTCATCTATGTCTACGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCGTAGACATAGATGAATGTACTCGAGTACATTCATCTATGTCTACGC-3'

Other clones with same target sequence:

  1. TRCN0000055966