Construct: shRNA TRCN0000292587

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_146121.2-2999s21c1
DNA Barcode:
GCTCTATCATTGGTGACTATA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Rabgap1 (227800)
Gene Description:
RAB GTPase activating protein 1
Transcript:
RefSeq NM_146121.2 (CURRENT)
Match location:
Position 2999 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000292587)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCTCTATCATTGGTGACTATA
Hairpin Sequence:
5'-CCGG-GCTCTATCATTGGTGACTATA-CTCGAG-TATAGTCACCAATGATAGAGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCTCTATCATTGGTGACTATACTCGAGTATAGTCACCAATGATAGAGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCTCTATCATTGGTGACTATACTCGAGTATAGTCACCAATGATAGAGC-3'

Other clones with same target sequence:

  1. TRCN0000193039