Construct: shRNA TRCN0000301601

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_080848.2-313s21c1
DNA Barcode:
GCCAAACTATGCCCTGAAGTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Wdr5 (140858)
Gene Description:
WD repeat domain 5
Transcript:
RefSeq NM_080848.2 (CURRENT)
Match location:
Position 313 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000301601)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCCAAACTATGCCCTGAAGTT
Hairpin Sequence:
5'-CCGG-GCCAAACTATGCCCTGAAGTT-CTCGAG-AACTTCAGGGCATAGTTTGGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCCAAACTATGCCCTGAAGTTCTCGAGAACTTCAGGGCATAGTTTGGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCCAAACTATGCCCTGAAGTTCTCGAGAACTTCAGGGCATAGTTTGGC-3'

Other clones with same target sequence:

  1. TRCN0000034417