Construct: shRNA TRCN0000302496

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_019809.2-610s21c1
DNA Barcode:
CTGCATGTTAGTGCCAATCTT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Pdlim5 (56376)
Gene Description:
PDZ and LIM domain 5
Transcript:
RefSeq NM_019809.2 (NON-CURRENT)
Match location:
Position 610 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000302496)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CTGCATGTTAGTGCCAATCTT
Hairpin Sequence:
5'-CCGG-CTGCATGTTAGTGCCAATCTT-CTCGAG-AAGATTGGCACTAACATGCAG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCTGCATGTTAGTGCCAATCTTCTCGAGAAGATTGGCACTAACATGCAGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACTGCATGTTAGTGCCAATCTTCTCGAGAAGATTGGCACTAACATGCAG-3'

Other clones with same target sequence:

  1. TRCN0000088641