Construct: shRNA TRCN0000303327

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_014944.3-3748s21c1
DNA Barcode:
CCACGATGTACAAAGTCATTT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CLSTN1 (22883)
Gene Description:
calsyntenin 1
Transcript:
RefSeq NM_014944.3 (NON-CURRENT)
Match location:
Position 3748 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000303327)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCACGATGTACAAAGTCATTT
Hairpin Sequence:
5'-CCGG-CCACGATGTACAAAGTCATTT-CTCGAG-AAATGACTTTGTACATCGTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCACGATGTACAAAGTCATTTCTCGAGAAATGACTTTGTACATCGTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCACGATGTACAAAGTCATTTCTCGAGAAATGACTTTGTACATCGTGG-3'

Other clones with same target sequence:

(none)