Construct: shRNA TRCN0000304895

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009280.1-1138s21c1
DNA Barcode:
ATTACTACGAAGGAGGAAACT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Ss18 (268996)
Gene Description:
SS18, nBAF chromatin remodeling complex subunit
Transcript:
RefSeq NM_009280.1 (NON-CURRENT)
Match location:
Position 1138 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000304895)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ATTACTACGAAGGAGGAAACT
Hairpin Sequence:
5'-CCGG-ATTACTACGAAGGAGGAAACT-CTCGAG-AGTTTCCTCCTTCGTAGTAAT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGATTACTACGAAGGAGGAAACTCTCGAGAGTTTCCTCCTTCGTAGTAATTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAATTACTACGAAGGAGGAAACTCTCGAGAGTTTCCTCCTTCGTAGTAAT-3'

Other clones with same target sequence:

(none)