Construct: shRNA TRCN0000305935
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_013495.2-2434s21c1
- DNA Barcode:
- ATGGACTCTAGTGATACAAAC
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Cpt1a (12894)
- Gene Description:
- carnitine palmitoyltransferase 1a, liver
- Transcript:
- RefSeq NM_013495.2 (CURRENT)
- Match location:
- Position 2434 (3UTR)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000305935)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- ATGGACTCTAGTGATACAAAC
- Hairpin Sequence:
-
5'-CCGG-ATGGACTCTAGTGATACAAAC-CTCGAG-GTTTGTATCACTAGAGTCCAT-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGATGGACTCTAGTGATACAAACCTCGAGGTTTGTATCACTAGAGTCCATTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAATGGACTCTAGTGATACAAACCTCGAGGTTTGTATCACTAGAGTCCAT-3'
Other clones with same target sequence:
(none)
