Construct: shRNA TRCN0000307986

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_021141.3-2357s21c1
DNA Barcode:
AATCTAAGAGAGCTGCCATCG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
XRCC5 (7520)
Gene Description:
X-ray repair cross complementing 5
Transcript:
RefSeq NM_021141.3 (NON-CURRENT)
Match location:
Position 2357 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000307986)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
AATCTAAGAGAGCTGCCATCG
Hairpin Sequence:
5'-CCGG-AATCTAAGAGAGCTGCCATCG-CTCGAG-CGATGGCAGCTCTCTTAGATT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGAATCTAAGAGAGCTGCCATCGCTCGAGCGATGGCAGCTCTCTTAGATTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAAATCTAAGAGAGCTGCCATCGCTCGAGCGATGGCAGCTCTCTTAGATT-3'

Other clones with same target sequence:

  1. TRCN0000010468