Construct: shRNA TRCN0000309848

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007791.5-253s21c1
DNA Barcode:
CAAGTCATGTTACGGCAAGAA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Csrp1 (13007)
Gene Description:
cysteine and glycine-rich protein 1
Transcript:
RefSeq NM_007791.5 (CURRENT)
Match location:
Position 253 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000309848)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAAGTCATGTTACGGCAAGAA
Hairpin Sequence:
5'-CCGG-CAAGTCATGTTACGGCAAGAA-CTCGAG-TTCTTGCCGTAACATGACTTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAAGTCATGTTACGGCAAGAACTCGAGTTCTTGCCGTAACATGACTTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAAGTCATGTTACGGCAAGAACTCGAGTTCTTGCCGTAACATGACTTG-3'

Other clones with same target sequence:

  1. TRCN0000125080