Construct: shRNA TRCN0000312353
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_144887.4-1374s21c1
- DNA Barcode:
- GCCCATTTACAATGCAATTAT
Original Target:
- Taxon:
-
Mus musculus (mouse)
- Gene:
- Zdhhc5 (228136)
- Gene Description:
- zinc finger, DHHC domain containing 5
- Transcript:
- RefSeq NM_144887.4 (CURRENT)
- Match location:
- Position 1374 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000312353)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCCCATTTACAATGCAATTAT
- Hairpin Sequence:
-
5'-CCGG-GCCCATTTACAATGCAATTAT-CTCGAG-ATAATTGCATTGTAAATGGGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCCCATTTACAATGCAATTATCTCGAGATAATTGCATTGTAAATGGGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCCCATTTACAATGCAATTATCTCGAGATAATTGCATTGTAAATGGGC-3'
Other clones with same target sequence:
-
TRCN0000125845
