Construct: shRNA TRCN0000315280
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_012300.2-1894s21c1
- DNA Barcode:
- GCTCCCATGATGACACTATTT
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- FBXW11 (23291)
- Gene Description:
- F-box and WD repeat domain containing 11
- Transcript:
- RefSeq NM_012300.2 (CURRENT)
- Match location:
- Position 1894 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000315280)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTCCCATGATGACACTATTT
- Hairpin Sequence:
-
5'-CCGG-GCTCCCATGATGACACTATTT-CTCGAG-AAATAGTGTCATCATGGGAGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTCCCATGATGACACTATTTCTCGAGAAATAGTGTCATCATGGGAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTCCCATGATGACACTATTTCTCGAGAAATAGTGTCATCATGGGAGC-3'
Other clones with same target sequence:
-
TRCN0000231305
-
TRCN0000012810
