Construct: shRNA TRCN0000318639

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_014771.2-1510s21c1
DNA Barcode:
CGCATCGAGTTTGAGCAGAAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
RNF40 (9810)
Gene Description:
ring finger protein 40
Transcript:
RefSeq NM_014771.2 (NON-CURRENT)
Match location:
Position 1510 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000318639)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CGCATCGAGTTTGAGCAGAAT
Hairpin Sequence:
5'-CCGG-CGCATCGAGTTTGAGCAGAAT-CTCGAG-ATTCTGCTCAAACTCGATGCG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCGCATCGAGTTTGAGCAGAATCTCGAGATTCTGCTCAAACTCGATGCGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACGCATCGAGTTTGAGCAGAATCTCGAGATTCTGCTCAAACTCGATGCG-3'

Other clones with same target sequence:

  1. TRCN0000004781