Construct: shRNA TRCN0000322405

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_010098.2-578s21c1
DNA Barcode:
ACAGGTACATCCTAGACATAC

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Opn3 (13603)
Gene Description:
opsin 3
Transcript:
RefSeq NM_010098.2 (NON-CURRENT)
Match location:
Position 578 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000322405)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ACAGGTACATCCTAGACATAC
Hairpin Sequence:
5'-CCGG-ACAGGTACATCCTAGACATAC-CTCGAG-GTATGTCTAGGATGTACCTGT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGACAGGTACATCCTAGACATACCTCGAGGTATGTCTAGGATGTACCTGTTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAACAGGTACATCCTAGACATACCTCGAGGTATGTCTAGGATGTACCTGT-3'

Other clones with same target sequence:

(none)