Construct: shRNA TRCN0000323189

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_032801.3-539s21c1
DNA Barcode:
ATGAGATTGTGATCGAGTTAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
JAM3 (83700)
Gene Description:
junctional adhesion molecule 3
Transcript:
RefSeq NM_032801.3 (NON-CURRENT)
Match location:
Position 539 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000323189)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
ATGAGATTGTGATCGAGTTAA
Hairpin Sequence:
5'-CCGG-ATGAGATTGTGATCGAGTTAA-CTCGAG-TTAACTCGATCACAATCTCAT-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGATGAGATTGTGATCGAGTTAACTCGAGTTAACTCGATCACAATCTCATTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAATGAGATTGTGATCGAGTTAACTCGAGTTAACTCGATCACAATCTCAT-3'

Other clones with same target sequence:

(none)