Construct: shRNA TRCN0000323193

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_004813.2-1541s21c1
DNA Barcode:
CCAAGAAGCCTTCACTAGGAG

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PEX16 (9409)
Gene Description:
peroxisomal biogenesis factor 16
Transcript:
RefSeq NM_004813.2 (NON-CURRENT)
Match location:
Position 1541 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000323193)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCAAGAAGCCTTCACTAGGAG
Hairpin Sequence:
5'-CCGG-CCAAGAAGCCTTCACTAGGAG-CTCGAG-CTCCTAGTGAAGGCTTCTTGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCAAGAAGCCTTCACTAGGAGCTCGAGCTCCTAGTGAAGGCTTCTTGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCAAGAAGCCTTCACTAGGAGCTCGAGCTCCTAGTGAAGGCTTCTTGG-3'

Other clones with same target sequence:

(none)