Construct: shRNA TRCN0000323996

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_009272.4-1050s21c1
DNA Barcode:
CAATCGGATTGGACCAAGGAT

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Srm (20810)
Gene Description:
spermidine synthase
Transcript:
RefSeq NM_009272.4 (CURRENT)
Match location:
Position 1050 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000323996)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CAATCGGATTGGACCAAGGAT
Hairpin Sequence:
5'-CCGG-CAATCGGATTGGACCAAGGAT-CTCGAG-ATCCTTGGTCCAATCCGATTG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCAATCGGATTGGACCAAGGATCTCGAGATCCTTGGTCCAATCCGATTGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACAATCGGATTGGACCAAGGATCTCGAGATCCTTGGTCCAATCCGATTG-3'

Other clones with same target sequence:

  1. TRCN0000075798