Construct: shRNA TRCN0000329351

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_024282.3-2431s21c1
DNA Barcode:
GCAGCTTTAGATACGTGATTA

Original Target:

Taxon:
Mus musculus (mouse)
Gene:
Desi2 (78825)
Gene Description:
desumoylating isopeptidase 2
Transcript:
RefSeq NM_024282.3 (CURRENT)
Match location:
Position 2431 (3UTR)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000329351)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GCAGCTTTAGATACGTGATTA
Hairpin Sequence:
5'-CCGG-GCAGCTTTAGATACGTGATTA-CTCGAG-TAATCACGTATCTAAAGCTGC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGCAGCTTTAGATACGTGATTACTCGAGTAATCACGTATCTAAAGCTGCTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGCAGCTTTAGATACGTGATTACTCGAGTAATCACGTATCTAAAGCTGC-3'

Other clones with same target sequence:

  1. TRCN0000177395