Construct: shRNA TRCN0000330069
Construct Description:
- Construct Type:
- shRNA
- Other Identifiers:
- NM_004965.6-400s21c1
- DNA Barcode:
- GCTAACCAAGAAACTAAAGAA
Original Target:
- Taxon:
-
Homo sapiens (human)
- Gene:
- HMGN1 (3150)
- Gene Description:
- high mobility group nucleosome binding domain 1
- Transcript:
- RefSeq NM_004965.6 (NON-CURRENT)
- Match location:
- Position 400 (CDS)
Vector Information:
- Vector Backbone:
- pLKO_005
- Pol II Cassette 1:
- PGK-PuroR
- Pol II Cassette 2:
- n/a
- Pol III Promoter:
- constitutive hU6
- Pol III Insert:
- (TRCN0000330069)
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
Current transcripts matched by this shRNA:
Sequence Information
- Target Sequence:
- GCTAACCAAGAAACTAAAGAA
- Hairpin Sequence:
-
5'-CCGG-GCTAACCAAGAAACTAAAGAA-CTCGAG-TTCTTTAGTTTCTTGGTTAGC-TTTTTG-3'
Oligo design for arrayed cloning:
- Forward sequence:
- 5'-CCGGGCTAACCAAGAAACTAAAGAACTCGAGTTCTTTAGTTTCTTGGTTAGCTTTTTG-3'
- Reverse sequence:
- 5'-AATTCAAAAAGCTAACCAAGAAACTAAAGAACTCGAGTTCTTTAGTTTCTTGGTTAGC-3'
Other clones with same target sequence:
-
TRCN0000019062
