Construct: shRNA TRCN0000332978

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_007172.3-1004s21c1
DNA Barcode:
GTGATCTGACACCTATCTTTA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
NUP50 (10762)
Gene Description:
nucleoporin 50
Transcript:
RefSeq NM_007172.3 (NON-CURRENT)
Match location:
Position 1004 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000332978)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
GTGATCTGACACCTATCTTTA
Hairpin Sequence:
5'-CCGG-GTGATCTGACACCTATCTTTA-CTCGAG-TAAAGATAGGTGTCAGATCAC-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGGTGATCTGACACCTATCTTTACTCGAGTAAAGATAGGTGTCAGATCACTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAAGTGATCTGACACCTATCTTTACTCGAGTAAAGATAGGTGTCAGATCAC-3'

Other clones with same target sequence:

  1. TRCN0000220054