Construct: shRNA TRCN0000338268

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_003668.2-475s21c1
DNA Barcode:
CCCAAACATAGTTCAGATTAT

Original Target:

Taxon:
Homo sapiens (human)
Gene:
MAPKAPK5 (8550)
Gene Description:
MAPK activated protein kinase 5
Transcript:
RefSeq NM_003668.2 (NON-CURRENT)
Match location:
Position 475 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000338268)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCCAAACATAGTTCAGATTAT
Hairpin Sequence:
5'-CCGG-CCCAAACATAGTTCAGATTAT-CTCGAG-ATAATCTGAACTATGTTTGGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCCAAACATAGTTCAGATTATCTCGAGATAATCTGAACTATGTTTGGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCCAAACATAGTTCAGATTATCTCGAGATAATCTGAACTATGTTTGGG-3'

Other clones with same target sequence:

  1. TRCN0000194823