Construct: shRNA TRCN0000338280

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_002836.3-787s21c1
DNA Barcode:
TCAACGGCAGAACCAGTTAAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
PTPRA (5786)
Gene Description:
protein tyrosine phosphatase receptor type A
Transcript:
RefSeq NM_002836.3 (CURRENT)
Match location:
Position 787 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000338280)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
TCAACGGCAGAACCAGTTAAA
Hairpin Sequence:
5'-CCGG-TCAACGGCAGAACCAGTTAAA-CTCGAG-TTTAACTGGTTCTGCCGTTGA-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGTCAACGGCAGAACCAGTTAAACTCGAGTTTAACTGGTTCTGCCGTTGATTTTTG-3'
Reverse sequence:
5'-AATTCAAAAATCAACGGCAGAACCAGTTAAACTCGAGTTTAACTGGTTCTGCCGTTGA-3'

Other clones with same target sequence:

(none)