Construct: shRNA TRCN0000338603

Construct Description:

Construct Type:
shRNA
Other Identifiers:
NM_014608.2-3647s21c1
DNA Barcode:
CCATCTACTTAAAGTCCAGAA

Original Target:

Taxon:
Homo sapiens (human)
Gene:
CYFIP1 (23191)
Gene Description:
cytoplasmic FMR1 interacting protein 1
Transcript:
RefSeq NM_014608.2 (NON-CURRENT)
Match location:
Position 3647 (CDS)

Vector Information:

Vector Backbone:
pLKO_005
Pol II Cassette 1:
PGK-PuroR
Pol II Cassette 2:
n/a
Pol III Promoter:
constitutive hU6
Pol III Insert:
(TRCN0000338603)
Selection Marker:
PuroR
Visible Reporter:
n/a

Current transcripts matched by this shRNA:

Sequence Information

Target Sequence:
CCATCTACTTAAAGTCCAGAA
Hairpin Sequence:
5'-CCGG-CCATCTACTTAAAGTCCAGAA-CTCGAG-TTCTGGACTTTAAGTAGATGG-TTTTTG-3'

Oligo design for arrayed cloning:

Forward sequence:
5'-CCGGCCATCTACTTAAAGTCCAGAACTCGAGTTCTGGACTTTAAGTAGATGGTTTTTG-3'
Reverse sequence:
5'-AATTCAAAAACCATCTACTTAAAGTCCAGAACTCGAGTTCTGGACTTTAAGTAGATGG-3'

Other clones with same target sequence:

  1. TRCN0000186347